Mathieu Courcelles

ORCID: 0000-0001-5961-8858

Publications (11)

Extending the Comprehensiveness of Immunopeptidome Analyses Using Isobaric Peptide Labeling.

Analytical chemistry

Avec: Sibylle Pfammatter , Eric Bonneil , Joel Lanoix , Krystel Vincent , Marie-Pierre Hardy , Mathieu Courcelles , Claude Perreault , Pierre Thibault

Proteogenomics Uncovers a Vast Repertoire of Shared Tumor-Specific Antigens in Ovarian Cancer.

Cancer immunology research

Avec: Qingchuan Zhao , Jean-Philippe Laverdure , Joël Lanoix , Chantal Durette , Caroline Côté , Éric Bonneil , Céline M Laumont , Patrick Gendron , Krystel Vincent , Mathieu Courcelles , Sébastien Lemieux , Douglas G Millar , Pamela S Ohashi , Pierre Thibault , Claude Perreault

Head-to-tail cyclization of side chain-protected linear peptides to recapitulate genetically-encoded cyclized peptides.

Peptide science (Hoboken, N.J.)

Avec: Samir Bouayad-Gervais , Daniel J St-Cyr , Mathieu Courcelles , Éric Bonneil , Florence H Gohard , Pierre Thibault , William C Earnshaw , Mike Tyers

Induced pluripotent stem cells display a distinct set of MHC I-associated peptides shared by human cancers.

Cell reports

Avec: Anca Apavaloaei , Leslie Hesnard , Marie-Pierre Hardy , Basma Benabdallah , Gregory Ehx , Catherine Thériault , Jean-Philippe Laverdure , Chantal Durette , Joël Lanoix , Mathieu Courcelles , Nandita Noronha , Kapil Dev Chauhan , Sébastien Lemieux , Christian Beauséjour , Mick Bhatia , Pierre Thibault , Claude Perreault

CAMAP: Artificial neural networks unveil the role of codon arrangement in modulating MHC-I peptides presentation.

PLoS computational biology

Avec: Tariq Daouda , Maude Dumont-Lagacé , Albert Feghaly , Yahya Benslimane , Rébecca Panes , Mathieu Courcelles , Mohamed Benhammadi , Lea Harrington , Pierre Thibault , François Major , Yoshua Bengio , Étienne Gagnon , Sébastien Lemieux , Claude Perreault

MhcVizPipe: A Quality Control Software for Rapid Assessment of Small- to Large-Scale Immunopeptidome Datasets.

Molecular & cellular proteomics : MCP

Avec: Kevin A Kovalchik , Qing Ma , Laura Wessling , Frederic Saab , Jérôme D Duquette , Peter Kubiniok , David J Hamelin , Pouya Faridi , Chen Li , Anthony W Purcell , Anne Jang , Eustache Paramithiotis , Marco Tognetti , Lukas Reiter , Roland Bruderer , Joël Lanoix , Éric Bonneil , Mathieu Courcelles , Pierre Thibault , Etienne Caron , Isabelle Sirois

Immunopeptidomic analyses of colorectal cancers with and without microsatellite instability.

Molecular & cellular proteomics : MCP

Avec: Jenna Cleyle , Marie-Pierre Hardy , Robin Minati , Mathieu Courcelles , Chantal Durette , Joel Lanoix , Jean-Philippe Laverdure , Krystel Vincent , Claude Perreault , Pierre Thibault

Most non-canonical proteins uniquely populate the proteome or immunopeptidome.

Cell reports

Avec: Maria Virginia Ruiz Cuevas , Marie-Pierre Hardy , Jaroslav Hollý , Éric Bonneil , Chantal Durette , Mathieu Courcelles , Joël Lanoix , Caroline Côté , Louis M Staudt , Sébastien Lemieux , Pierre Thibault , Claude Perreault , Jonathan W Yewdell

Breast cancer immunopeptidomes contain numerous shared tumor antigens.

The Journal of clinical investigation

Avec: Eralda Kina , Jean-Philippe Laverdure , Chantal Durette , Joël Lanoix , Mathieu Courcelles , Qingchuan Zhao , Anca Apavaloaei , Jean-David Larouche , Marie-Pierre Hardy , Krystel Vincent , Patrick Gendron , Leslie Hesnard , Catherine Thériault , Maria Virginia Ruiz Cuevas , Grégory Ehx , Pierre Thibault , Claude Perreault

MAPDP: A Cloud-Based Computational Platform for Immunopeptidomics Analyses.

Journal of proteome research

Avec: Mathieu Courcelles , Chantal Durette , Tariq Daouda , Jean-Philippe Laverdure , Krystel Vincent , Sébastien Lemieux , Claude Perreault , Pierre Thibault

SUMO Proteomics Analyses Identify Protein Inhibitor of Activated STAT-Mediated Regulatory Networks Involved in Cell Cycle and Cell Proliferation.

Journal of proteome research

Avec: Chongyang Li , Alison Boutet , Cristina Mirela Pascariu , Trent Nelson , Mathieu Courcelles , Zhaoguan Wu , Simon Comtois-Marotte , Gregory Emery , Pierre Thibault

Réseau de co-auteurs

Pierre Thibault 11 collaborations

Claude Perreault 8 collaborations

Chantal Durette 6 collaborations

Krystel Vincent 5 collaborations

Marie-Pierre Hardy 5 collaborations

Jean-Philippe Laverdure 5 collaborations

Joël Lanoix 5 collaborations

Sébastien Lemieux 5 collaborations

Éric Bonneil 4 collaborations

Joel Lanoix 2 collaborations

Qingchuan Zhao 2 collaborations

Caroline Côté 2 collaborations

Patrick Gendron 2 collaborations

Anca Apavaloaei 2 collaborations

Leslie Hesnard 2 collaborations

Catherine Thériault 2 collaborations

Tariq Daouda 2 collaborations

Maria Virginia Ruiz Cuevas 2 collaborations

Sibylle Pfammatter 1 collaboration

Eric Bonneil 1 collaboration

Céline M Laumont 1 collaboration

Douglas G Millar 1 collaboration

Pamela S Ohashi 1 collaboration

Samir Bouayad-Gervais 1 collaboration

Daniel J St-Cyr 1 collaboration

Florence H Gohard 1 collaboration

William C Earnshaw 1 collaboration

Mike Tyers 1 collaboration

Basma Benabdallah 1 collaboration

Gregory Ehx 1 collaboration

Nandita Noronha 1 collaboration

Kapil Dev Chauhan 1 collaboration

Christian Beauséjour 1 collaboration

Mick Bhatia 1 collaboration

Maude Dumont-Lagacé 1 collaboration

Albert Feghaly 1 collaboration

Yahya Benslimane 1 collaboration

Rébecca Panes 1 collaboration

Mohamed Benhammadi 1 collaboration

Lea Harrington 1 collaboration

François Major 1 collaboration

Yoshua Bengio 1 collaboration

Étienne Gagnon 1 collaboration

Kevin A Kovalchik 1 collaboration

Qing Ma 1 collaboration

Laura Wessling 1 collaboration

Frederic Saab 1 collaboration

Jérôme D Duquette 1 collaboration

Peter Kubiniok 1 collaboration

David J Hamelin 1 collaboration

Pouya Faridi 1 collaboration

Chen Li 1 collaboration

Anthony W Purcell 1 collaboration

Anne Jang 1 collaboration

Eustache Paramithiotis 1 collaboration

Marco Tognetti 1 collaboration

Lukas Reiter 1 collaboration

Roland Bruderer 1 collaboration

Etienne Caron 1 collaboration

Isabelle Sirois 1 collaboration

Jenna Cleyle 1 collaboration

Robin Minati 1 collaboration

Jaroslav Hollý 1 collaboration

Louis M Staudt 1 collaboration

Jonathan W Yewdell 1 collaboration

Eralda Kina 1 collaboration

Jean-David Larouche 1 collaboration

Grégory Ehx 1 collaboration

Chongyang Li 1 collaboration

Alison Boutet 1 collaboration

Cristina Mirela Pascariu 1 collaboration

Trent Nelson 1 collaboration

Zhaoguan Wu 1 collaboration

Simon Comtois-Marotte 1 collaboration

Gregory Emery 1 collaboration